Mark J. Halsted, Laurie A. Perry, Timothy P. Cripe, Margaret H. Collins, Rex Jakobovits, Corning Benton, and David G. Halsted. Improving Patient Care: The Use of a Digital Teaching File to Enhance Clinicians' Access to the Intellectual Capital of Interdepartmental Conferences . AJR 2004;182:307-309.

R. Jakobovits, M. Halsted, M. Shanaman, E. Weinberger. Developing a teaching file authoring system using content management technology. Journal of Digital Imaging, supplement to volume 16 2003, Proceedings of the 20th Symposium for Computer Applications in Radiology:67-69.

E. Weinberger, R. Jakobovits, M. Halsted. MyPACS.net: A Web-Based Teaching File Authoring Tool . AJR Am J Roentgenol 2002 Sep;179(3):579-82.

R. Jakobovits, C. Rosse, J. Brinkley. WIRM: An Open Source Toolkit for Building Biomedical Web Applications. Journal of Am Med Inform Assoc 2002; 9: 557-570.

R. Jakobovits, M. Halsted, M. Shanaman, E. Weinberger. MyPACS.net: A Content Management System for Teaching Files. Abstracts of the Radiology Society of North America Annual Meeting, November 2002.

J. Brinkley., R. Jakobovits, C. Rosse. An Online Image Management System for Anatomy Teaching. Proceedings of the American Medican Informatics Association Fall Symposium, Sept. 2002.

R. Jakobovits, M. Halsted, M. Shanaman, E. Weinberger. Teaching File Modeling Language (TFML): An XML Standard for Integrating Online Teaching File Repositories. Abstracts of the Radiology Society of North America Annual Meeting, November 2001.

R. Jakobovits, M. Halsted, E. Weinberger. MyPACS.net: A Web-based Teaching File Authoring System. Abstracts of the Radiology Society of North America Annual Meeting, November 2001.

R. Jakobovits, J. Brinkley, C. Rosse, and E. Weinberger. Enabling Clinicians, Researchers, and Educators to Build Custom Web-Based Biomedical Information Systems. Proceedings of the 2001 American Medical Informatics Association Annual Symposium, Washington DC, pp. 279-283, October 2001.

R. Jakobovits. WIRM: A Perl-Based Application Server. Web Techniques, September 2000, pp. 97-100. Presented at the O'Reilly Open Source Convention, Navigating the Future of Open Source, July 2000, Monterey, CA.

R. Jakobovits, S. Soderland, R. Taira, and J. Brinkley. Requirements of a Web-Based Experiment Management System. Proceedings, 2000 American Medical Informatics Association Symposium, pp.374-378.

R. Jakobovits, R. Livingston, E. Weinberger. MyPACS.net: a service for creating web-based teaching file repositories. InfoRad Abstracts, Radiology Society of North America Annual Meeting, November 2000, p.696.

R. Jakobovits, S. Soderland, R. Taira, and J. Brinkley. The Web-Interfacing Repository Manager: A Framework for Developing Web-Based Multimedia Applications for Medical Research. In Proceedings, 2000 International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences, Las Vegas, June 2000.

R. Taira, S. Soderland, and R. Jakobovits. Automatic Structuring of Radiology Free Text Reports. RadioGraphics, 2001 21: 237-245.

S. Soderland, R. Taira, R. Jakobovits, and E. Effmann. Automated Analysis of Serial CT Reports from Pediatric Metastatic Lung Cancer Patients. Abstracts, Radiology Society of North America Annual Meeting,, 2000, p.704.

A. Poliakov, R. Jakobovits, R. Martin, D. Corina, and J. Brinkley. Software Tools for Visualization and Analysis of Human Brain Data for Language Mapping. Human Brain Mapping Annual Meeting, San Antonio, Texas, June 2000.

R. Taira, S. Soderland, and R. Jakobovits. A Statistical Natural Language Processor for Medical Reports. In Proceedings, 2000 International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences, Las Vegas, June 2000.

S. Soderland, R. Taira, and R. Jakobovits. A Statistically Based Medical Text Understanding System. UCLA Department of Radiological Sciences Technical Report, November 1999.

C. Rosse, J. Mejino, B. Modayur, R. Jakobovits, K. Hinshaw and J. F. Brinkley. Motivation and Organizational Principles for Anatomical Knowledge Representation: the Digital Anatomist Symbolic Knowledge Base. Journal of the American Medical Informatics Association, vol. 5, no. 1, pp. 17-40, January 1998.

R. Jakobovits and J.F. Brinkley. Query-By-Context: A Framework for Modeling and Navigating Multimedia Research Data. In Proceedings, Annual Fall Symposium, Orlando, Nov. 7-11, American Medical Informatics Association, 1998.

R. Jakobovits. Integrating Heterogeneous Autonomous Information Sources. Univ. of Washington Technical Report, UW-CSE-971205, July 1997.

R. Jakobovits and J. F. Brinkley. Managing Medical Research Data with a Web-Interfacing Repository Manager. In Proceedings, Annual Fall Symposium, pages 454-458, Nashville, Oct 25-29, American Medical Informatics Association, 1997.

B.Modayur, R.Jakobovits, K.Maravilla, G.Ojemann, and J.F.Brinkley. Evaluation of a visualization-based approach to functional brain mapping. In Proceedings, Annual Fall Symposium, pages 429-433, Nashville, Oct 25-29, American Medical Informatics Association, 1997.

B.Modayur, G.Ojemann, E.Lettich, R.Jakobovits, J.Sundsten, and J.F.Brinkley. Information system for mapping and studying cortical language organization. In Abstracts, Society for Neuroscience Annual Meeting, pages 2228, New Orleans, October 25-30, 1997.

B. Modayur, J. Prothero, C. Rosse, R. Jakobovits, and J. F. Brinkley. Visualization and mapping of neurosurgical functional data onto a 3-D MR-based model of the brain surface. In Proceedings, 1996 AMIA Fall Symposium Washington, D.C., pp. 304-308, 1996.

R. Jakobovits, L. Lewis, J. Ahrens, L. Shapiro, S. Tanimoto, J. F. Brinkley. A Visual Database Environment for Scientific Research. Journal of Visual Languages and Computing, Vol. 7, pp. 361-375, 1996.

R. Jakobovits, B. Modayur, and J. F. Brinkley. A Web-Based Repository Manager for Brain Mapping Data. In Proceedings, AMIA Fall Symposium, pages 309-313, Washington, D.C., Oct 28-30, American Medical Informatics Association, 1996.

R. Jakobovits, L. Shapiro, and S. Tanimoto. Implementing Multi-Level Queries in a Database Environment for Vision Research. In IS&T SPIE Symposium on Electronic Imaging: Science & Technology, February 1995.

L.Shapiro, S.Tanimoto, J.F.Brinkley, J.Ahrens, R.Jakobovits, and L.Lewis. A visual database system for data and experiment management in model-based computer vision. In Proceedings of the Second CAD-Based Vision Workshop, pages 64-72, February 1994.

R. Jakobovits. Persistent Programming Languages: the Best of Both Worlds. Univ. of Washington Technical Report, UW-CSE-971203, Dec. 1993.